Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs10146144 chr14:78325300 T/C 1.23E-5 119 22.5 50.1 37.63 KM Plot
THYM rs10167460 chr2:30821619 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10169001 chr2:30688242 G/A 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs10169512 chr2:30688682 G/C 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs10170012 chr2:30743396 G/A 1.4E-8 118 37.37 50.1 33.13 KM Plot
THYM rs10174170 chr2:30722290 T/C 1.28E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10176138 chr2:30750828 G/A 1.86E-8 117 36.4 50.1 33.13 KM Plot
THYM rs10178307 chr2:30821641 G/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10178829 chr2:30703505 C/T 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs10180054 chr2:30705622 A/G 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs10181161 chr2:30760883 A/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10182400 chr2:10956301 C/T 0.000218 117 42.9 38.58 62.72 KM Plot
THYM rs10186917 chr2:30802825 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10192112 chr2:10958948 C/T 0.000255 119 42.9 38.23 62.72 KM Plot
THYM rs10197595 chr2:10956867 A/G 0.000255 119 42.9 38.23 62.72 KM Plot